Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908550.1_cds_XP_016458678.1_52279
CDS Infomation

[gene=LOC107782317] [db_xref=GeneID:107782317] [protein=condensin-2 complex subunit H2-like] [protein_id=XP_016458678.1] [location=join(21869..22058,22192..22291,23461..23555,23645..23787,23860..24322,24408..24583,24662..24835,24938..25027,27699..27800,27877..28035,28183..28533)] [gbkey=CDS]
Sequence

ATGAGAAAAGAGCAAGAAGAACCAAGCAGCCGCGGGTTTCATAATTTACAGCCACATCGA
GACCTCGAATCGAATTGGGGGGTTGACGTGGCCAAAAATTTAGAAGACTATTTGCTTAAA
ATCTGTTCTGGTGAAATTGCTGCTGCTGACCATGATAATGCTAATTGCCTTTCTGTCAAT
TTTGCTGAAGCTGCATTGCTGCTTCAGGGATCAGTTCAGGTTTACAGCAGGAAGGTTGAA
TATTTGTATTCATTGGTATTACATGCCTTGGAGTTCATTACCCAGAAAAGCGAGCAGGAC
CACCCAGAAAGTGCATCAGCACAGGCAGAGGAAAATGCTAATGATGAAGAGAATGATCCA
TTCTGGGTCTCAGAAGAAATCCCTGTGGAAGCAAAGAACTTGCTGGATAGTGCAACACAT
AGGGATTCTTCACTGACCCAGTTAGTGAAACCCCCTGCAAATCTGGTTGTCCGTGAAGGT
GATTGCCTGGACTCTACAGGAGATTCAGGAGAACTAGAGTCTTACTTGCTAGCCACATGT
GATCTTTACCGAGATTTTATTCTGTTGGACTCCTGTGATGCTGTAGCAGTGGATAATTTT
TGGAACAACGATGTTGCGGGGAAGGGGCTAAACAATAGCTGCAGGGGTGGTTCTGTAGGT
TCCAAACATCGAAAGAGCTTTCTCTCTCCCACTAGAGTTTCTGAGGGCACTGCCAACAAG
TTTTCAGCTCAAAAGAGCCACGATGCTAATTTTTGTATGCCACCAAGGGTTGAGCCTGAG
TTTGGTCCTGCAAGTTATAAAGGTGATTGTGACATGCCTGATAATTACGATAATGGTAAT
TGTGATATTCCTGATAATTACGACGATGGACATGGAGGTGAAGATGGATACCCAGAGCCT
AGAGATTCAGATGACTCTGACGATGAAGACCCATGGAAACCCTTGAATCCCCATGAACCT
GGCGATTTGAAAGTAAAACCTTACAGAAAAGTTAATTTTAGTAGAAGGCAGGGTGTGGAT
TCCAGAAAACGTGCATCTTTGGCTATAGAGTTTACACTTGCAAGATTACATGGTACCACC
AGTTCAGACCTCAATGATATATGGGAGAAAAAATATTGTGCCATGAAAAAGCAGGGAGAC
TCACAATCTCCTCCTCCTTATGAGAAGCTGCGAGAATCACTTATTAGGGGGTTGAACGAA
GATTATGATGACCTGTTTAGTCCTAAGGAAAACAATGAAGAAAATGAATATGATAGTGGA
GATCCTGATTTTGGGCAACCTGATTATGACGTACCAGAATTGGCAGATGCGAATGAGGAT
GTAACTCAACACGGTGAAAAGCATAAAAATTATGGTTCACCCTTTGACAATGGCACTCAT
GAATATCCCGATGCTCATGCAAACCTTGAAGATCTTTGTCGCTCCCACTTAGATGCTCTT
CTAGATAACCTTGCTGAAACTGAAAAGCAGAGTGAACTGGCTGCTCGAGTTTCAACATGG
AGGCAGAGAATTGAGCAGAACTTGGAGGAACAAGACTCACATCCACCCTTTGATATTGCT
GAATATGGGGCTCGGGTTTTGGGCAAGTTATCGCTGGAAGGGAATAGTACAAACTCGATG
TCTTTTTCTGATGTTGTCATGGGCCAAAAGAAGCATGATGTTGCTCGAACATTTTCTGCA
CTTCTGCAATTGGTAAATAATGGTGATGTTGATTTGGAAAAGGGTAGAACAAACGAGTTC
ACTTGTTACACAGCTGTGAATCCCTTCTATGTTCGACTCCTTAGGCGTGATAATAGGCCG
AAGATGCAGCTGCAGTCTCCGAAAGAGAGAGCAAACTCTTCCATTTCCAATCGGTATAGA
AAGCGAAAGAACAAAGGTAAAGAAAACCAAGCACCTCTTGGTTCATCGCCTTCAGCACCC
AGTTCAGCTTGCAGTTTTGCGGTGAAGTTTGGAAAGTTTAGTGGAACTAGGTGCACGCCT
GAGAGCAAGAAAAGAAGGAAGTCCAGAATAGTGGAACCAGTTGAATTACATACTGCATTG
TGA

Peptide Sequence

PEP ID

XP_016458678.1
PEP Infomation

PREDICTED: condensin-2 complex subunit H2-like [Nicotiana tabacum]
Sequence

MRKEQEEPSSRGFHNLQPHRDLESNWGVDVAKNLEDYLLKICSGEIAAADHDNANCLSVN
FAEAALLLQGSVQVYSRKVEYLYSLVLHALEFITQKSEQDHPESASAQAEENANDEENDP
FWVSEEIPVEAKNLLDSATHRDSSLTQLVKPPANLVVREGDCLDSTGDSGELESYLLATC
DLYRDFILLDSCDAVAVDNFWNNDVAGKGLNNSCRGGSVGSKHRKSFLSPTRVSEGTANK
FSAQKSHDANFCMPPRVEPEFGPASYKGDCDMPDNYDNGNCDIPDNYDDGHGGEDGYPEP
RDSDDSDDEDPWKPLNPHEPGDLKVKPYRKVNFSRRQGVDSRKRASLAIEFTLARLHGTT
SSDLNDIWEKKYCAMKKQGDSQSPPPYEKLRESLIRGLNEDYDDLFSPKENNEENEYDSG
DPDFGQPDYDVPELADANEDVTQHGEKHKNYGSPFDNGTHEYPDAHANLEDLCRSHLDAL
LDNLAETEKQSELAARVSTWRQRIEQNLEEQDSHPPFDIAEYGARVLGKLSLEGNSTNSM
SFSDVVMGQKKHDVARTFSALLQLVNNGDVDLEKGRTNEFTCYTAVNPFYVRLLRRDNRP
KMQLQSPKERANSSISNRYRKRKNKGKENQAPLGSSPSAPSSACSFAVKFGKFSGTRCTP
ESKKRRKSRIVEPVELHTAL

Transcript Sequence

Gene sequence data has not been registered.